Publications

2014
M. Cohen, Levy, G. , and Nahmias, Y. . 2014. Coculture And Long-Term Maintenance Of Hepatocytes. Methods In Molecular Biology, 1250, Pp. 161-173. doi:10.1007/978-1-4939-2074-7_11. Publisher's Version Abstract
The liver is the largest internal organ in mammals, serving a wide spectrum of vital functions. Loss of liver function due to drug toxicity, progressive fatty liver disease, or viral infection is a major cause of death in the United States of America. Pharmaceutical and cosmetic toxicity screening, basic research and the development of bioartificial liver devices require long-term hepatocyte culture techniques that sustain hepatocyte morphology and function. In recent years, several techniques have been developed that can support high levels of liver-specific gene expression, metabolic function, and synthetic activity for several weeks in culture. These include the collagen double gel configuration, hepatocyte spheroids, coculture with nonparenchymal cells, and micropatterned cocultures. This chapter will cover the current status of hepatocyte culture techniques, including media formulation, oxygen supply, and heterotypic cell-cell interactions. © Springer Science+Business Media New York 2015.
M. Cohen, Kitsberg, D. , Tsytkin, S. , Shulman, M. , Aroeti, B. , and Nahmias, Y. . 2014. Live Imaging Of Glut2 Glucosedependent Trafficking And Its Inhibition In Polarized Epithelial Cysts. Open Biology, 4. doi:10.1098/rsob.140091. Publisher's Version Abstract
GLUT2 is a facilitative glucose transporter, expressed in polarized epithelial cells of the liver, intestine, kidney and pancreas, where it plays a critical role in glucose homeostasis. Togetherwith SGLT1/2, it mediates glucose absorption in metabolic epithelial tissues, where it can be translocated apically upon high glucose exposure. To track the subcellular localization and dynamics of GLUT2, we created an mCherry-hGLUT2 fusion protein and expressed it in multicellular kidney cysts, a major site of glucose reabsorption. Live imaging of GLUT2 enabled us to avoid the artefactual localization of GLUT2 in fixed cells and to confirm the apical GLUT2 model. Live cell imaging showed a rapid 15±3 min PKC-dependent basal-to-apical translocation of GLUT2 in response to glucose stimulation and a fourfold slower basolateral translocation under starvation. These results mark the physiological importance of responding quickly to rising glucose levels. Importantly, we show that phloretin, an apple polyphenol, inhibits GLUT2 translocation in both directions, suggesting that it exerts its effect by PKC inhibition. Subcellular localization studies demonstrated that GLUT2 is endocytosed through a caveolae-dependent mechanism, and that it is at least partly recovered in Rab11A-positive recycling endosome. Our work illuminates GLUT2 dynamics, providing a platform for drug development for diabetes and hyperglycaemia. © 2014 The Authors.
B. Zhu, Nahmias, Y. , Yarmush, M.L. , and Murthy, S.K. . 2014. Microfluidic Isolation Of Cd34-Positive Skin Cells Enables Regeneration Of Hair And Sebaceous Glands In Vivo. Stem Cells Translational Medicine, 3, Pp. 1354-1363. doi:10.5966/sctm.2014-0098. Publisher's Version Abstract
Skin stem cells resident in the bulge area of hair follicles and at the basal layer of the epidermis are multipotent and able to self-renew when transplanted into full-thickness defects in nude mice. Based on cell surface markers such as CD34 and thea6-integrin, skin stem cells can be extracted from tissuederived cell suspensions for engraftment using the gold standard cell separation technique of fluorescence-activated cell sorting (FACS). This paper describes an alternative separation method using microfluidic devices coated with degradable antibody-functionalized hydrogels. The microfluidic method allows direct injection of tissue digestate (no preprocessing tagging of cells is needed), is fast (45 minutes from injected sample to purified cells), and scalable. This method is used in this study to isolate CD34-positive (CD34+) cells from murine skin tissue digestate, and the functional capability of these cells is demonstrated by transplantation into nude mice using protocols developed by other groups for FACS-sorted cells. Specifically, the transplantation of microfluidic isolated CD34+ cells along with dermal and epidermal cells was observed to generate significant levels of hair follicles and sebaceous glands consistent with those observed previously with FACS-sorted cells. © AlphaMed Press.
B.D. Harrison, Hashemi, J. , Bibi, M. , Pulver, R. , Bavli, D. , Nahmias, Y. , Wellington, M. , Sapiro, G. , and Berman, J. . 2014. A Tetraploid Intermediate Precedes Aneuploid Formation In Yeasts Exposed To Fluconazole. Plos Biology, 12. doi:10.1371/journal.pbio.1001815. Publisher's Version Abstract
Candida albicans, the most prevalent human fungal pathogen, is generally diploid. However, 50% of isolates that are resistant to fluconazole (FLC), the most widely used antifungal, are aneuploid and some aneuploidies can confer FLC resistance. To ask if FLC exposure causes or only selects for aneuploidy, we analyzed diploid strains during exposure to FLC using flow cytometry and epifluorescence microscopy. FLC exposure caused a consistent deviation from normal cell cycle regulation: nuclear and spindle cycles initiated prior to bud emergence, leading to "trimeras," three connected cells composed of a mother, daughter, and granddaughter bud. Initially binucleate, trimeras underwent coordinated nuclear division yielding four daughter nuclei, two of which underwent mitotic collapse to form a tetraploid cell with extra spindle components. In subsequent cell cycles, the abnormal number of spindles resulted in unequal DNA segregation and viable aneuploid progeny. The process of aneuploid formation in C. albicans is highly reminiscent of early stages in human tumorigenesis in that aneuploidy arises through a tetraploid intermediate and subsequent unequal DNA segregation driven by multiple spindles coupled with a subsequent selective advantage conferred by at least some aneuploidies during growth under stress. Finally, trimera formation was detected in response to other azole antifungals, in related Candida species, and in an in vivo model for Candida infection, suggesting that aneuploids arise due to azole treatment of several pathogenic yeasts and that this can occur during the infection process. © 2014 Harrison et al.
2013
D. Uzi, Barda, L. , Scaiewicz, V. , Mills, M. , Mueller, T. , Gonzalez-Rodriguez, A. , Valverde, A.M. , Iwawaki, T. , Nahmias, Y. , Xavier, R. , Chung, R.T. , Tirosh, B. , and Shibolet, O. . 2013. Chop Is A Critical Regulator Of Acetaminophen-Induced Hepatotoxicity. Journal Of Hepatology, 59, Pp. 495-503. doi:10.1016/j.jhep.2013.04.024. Publisher's Version Abstract
Background & Aims The liver is a major site of drug metabolism and elimination and as such is susceptible to drug toxicity. Drug induced liver injury is a leading cause of acute liver injury, of which acetaminophen (APAP) is the most frequent causative agent. APAP toxicity is initiated by its toxic metabolite NAPQI. However, downstream mechanisms underlying APAP induced cell death are still unclear. Endoplasmic reticulum (ER) stress and the unfolded protein response (UPR) have recently emerged as major regulators of metabolic homeostasis. UPR regulation of the transcription repressor CHOP promotes cell death. We analyzed the role of UPR and CHOP in mediating APAP hepatotoxicity. Methods A toxic dose of APAP was orally administered to wild type (wt) and CHOP knockout (KO) mice and damage mechanisms were assessed. Results CHOP KO mice were protected from APAP induced damage and exhibited decreased liver necrosis and increased survival. APAP metabolism in CHOP KO mice was undisturbed and glutathione was depleted at similar kinetics to wt. ER stress and UPR activation were overtly seen 12 h following APAP administration, a time that coincided with strong upregulation of CHOP. Remarkably, CHOP KO but not wt mice exhibited hepatocyte proliferation at sites of necrosis. In vitro, large T immortalized CHOP KO hepatocytes were protected from APAP toxicity in comparison to wt control cells. Conclusions CHOP upregulation during APAP induced liver injury compromises hepatocyte survival in various mechanisms, in part by curtailing the regeneration phase following liver damage. Thus, CHOP plays a pro-damage role in response to APAP intoxication. © 2013 European Association for the Study of the Liver.
P. Roelandt, Obeid, S. , Paeshuyse, J. , Vanhove, J. , Van Lommel, A. , Nahmias, Y. , Nevens, F. , Neyts, J. , and Verfaillie, C.M. . 2013. Erratum: Human Pluripotent Stem Cell-Derived Hepatocytes Support Complete Replication Of Hepatitis C Virus (Journal Of Hepatology (2012) 57 (246-251)). Journal Of Hepatology, 58, Pp. 199-200. doi:10.1016/j.jhep.2012.08.021. Publisher's Version
Y. Avior, Bomze, D. , Ramon, O. , and Nahmias, Y. . 2013. Flavonoids As Dietary Regulators Of Nuclear Receptor Activity. Food And Function, 4, Pp. 831-844. doi:10.1039/c3fo60063g. Publisher's Version Abstract
Metabolic diseases such as obesity, type II diabetes, and dyslipidemia are a rising cause of mortality worldwide. The progression of many metabolic diseases is fundamentally regulated on the transcriptional level by a family of ligand-activated transcription factors, called nuclear receptors, which detect and respond to metabolic changes. Their role in maintaining metabolic homeostasis makes nuclear receptors an important pharmaceutical and dietary target. This review will present the growing evidence that flavonoids, natural secondary plant metabolites, are important regulators of nuclear receptor activity. Structural similarities between flavonoids and cholesterol derivatives combined with the promiscuous nature of most nuclear receptors provide a wealth of possibilities for pharmaceutical and dietary modulation of metabolism. While the challenges of bringing flavonoid-derived therapeutics to the market are significant, we consider this rapidly growing field to be an essential aspect of the functional food initiative and an important mine for pharmaceutical compounds. © The Royal Society of Chemistry.
E. Keinan, Ezra, E. , and Nahmias, Y. . 2013. Frame Rate Free Image Velocimetry For Microfluidic Devices. Applied Physics Letters, 103. doi:10.1063/1.4818142. Publisher's Version Abstract
Here, we introduce Streamline Image Velocimetry, a method to derive fluid velocity fields in fully developed laminar flow from long-exposure images of streamlines. Streamlines confine streamtubes, in which the volumetric flow is constant for incompressible fluid. Using an explicit analytical solution as a boundary condition, velocity fields and emerging properties such as shear force and pressure can be quantified throughout. Numerical and experimental validations show a high correlation between anticipated and measured results, with R2 > 0.91. We report spatial resolution of 2 μm in a flow rate of 0.15 m/s, resolution that can only be achieved with 75 kHz frame rate in traditional particle tracking velocimetry. © 2013 AIP Publishing LLC.
M. Shulman and Nahmias, Y. . 2013. Long-Term Culture And Coculture Of Primary Rat And Human Hepatocytes. Methods In Molecular Biology, 945, Pp. 287-302. doi:10.1007/978-1-62703-125-7_17. Publisher's Version Abstract
The liver is the largest internal organ in mammals, serving a wide spectrum of vital functions. Loss of liver function due to drug toxicity or viral infection is a major cause of death in the United States. The development of Bioartificial Liver (BAL) devices and the demand for pharmaceutical and cosmetic toxicity screening require the development of long-term hepatocyte culture techniques. However, primary hepatocytes rapidly lose their cuboidal morphology and liver-specific functions over a few days in culture. Accumulation of stress fibers, loss of metabolic function, and cell death are known phenomena. In recent years, several techniques were developed that can support high levels of liver-specific gene expression, metabolic and synthetic function for several weeks in culture. These include the collagen double-gel configuration, hepatocyte spheroids, coculture with endothelial cells, and micropatterned cocultures with 3T3-J2 fibroblasts. This chapter covers the current status of hepatocyte culture techniques, including: hepatocyte isolation, media formulation, oxygen supply, heterotypic cell-cell interactions, and basic functional assays. © 2013 Springer Science+Business Media, LLC.
B. Zhu, Smith, J. , Yarmush, M.L. , Nahmias, Y. , Kirby, B.J. , and Murthy, S.K. . 2013. Microfluidic Enrichment Of Mouse Epidermal Stem Cells And Validation Of Stem Cell Proliferation In Vitro. Tissue Engineering - Part C: Methods, 19, Pp. 765-773. doi:10.1089/ten.tec.2012.0638. Publisher's Version Abstract
Bulge stem cells reside in the lowest permanent portion of hair follicles and are responsible for the renewal of these follicles along with the repair of the epidermis during wound healing. These cells are identified by surface expression of CD34 and the α6-integrin. When CD34 and α6 double-positive cells are isolated and implanted into murine skin, they give rise to epidermis and hair follicle structures. The current gold standard for isolation of these stem cells is fluorescence-activated cell sorting (FACS) based on cell surface markers. Here, we describe an alternative method for CD34 bulge stem cell isolation: a microfluidic platform that captures stem cells based on cell surface markers. This method is relatively fast, requiring 30 min of time from direct introduction of murine skin tissue digestate into a two-stage microfluidic device to one-pass elution of CD34+ enriched cells with a purity of 55.8%±5.1%. The recovered cells remain viable and formed colonies with characteristic morphologies. When grown in culture, enriched cells contain a larger α6+ population than un-enriched cells. © 2013, Mary Ann Liebert, Inc.
E. Ezra, Keinan, E. , Mandel, Y. , Boulton, M.E. , and Nahmias, Y. . 2013. Non-Dimensional Analysis Of Retinal Microaneurysms: Critical Threshold For Treatment. Integrative Biology (United Kingdom), 5, Pp. 474-480. doi:10.1039/c3ib20259c. Publisher's Version Abstract
Fluid dynamics play a fundamental role in the development of diabetic retinopathy, one of the leading causes of blindness in the Western world, affecting over 4 million people in the US alone. The disease is defined by microaneurysms, local expansions of capillaries that disturb the hemodynamic forces experienced by the endothelium leading to dysfunction, leakage and edema. Here we present a method to identify microaneurysms with a high risk of leakage based on a critical ratio of microaneurysm to vessel diameter. We derive this non-dimensional parameter from an analytical solution and generalize it using experimentally validated numerical methods. We show that this non-dimensional parameter defines the shear force experienced by endothelial cells, below which endothelial dysfunction is evident in vivo. Our results demonstrate the involvement of vWF in diabetic retinopathy, and explain a perceived disconnect between microaneurysm size and leakage. This method will allow experts to treat microaneurysms poising a high-risk of leakage, prior to edema, minimizing damage and saving vision. © 2013 The Royal Society of Chemistry.
J. Bao, Fisher, J.E. , Lillegard, J.B. , Wang, W. , Amiot, B. , Yu, Y. , Dietz, A.B. , Nahmias, Y. , and Nyberg, S.L. . 2013. Serum-Free Medium And Mesenchymal Stromal Cells Enhance Functionality And Stabilize Integrity Of Rat Hepatocyte Spheroids. Cell Transplantation, 22, Pp. 299-308. doi:10.3727/096368912X656054. Publisher's Version Abstract
Long-term culture of hepatocyte spheroids with high ammonia clearance is valuable for therapeutic applications, especially the bioartificial liver. However, the optimal conditions are not well studied. We hypothesized that liver urea cycle enzymes can be induced by high protein diet and maintain on a higher expression level in rat hepatocyte spheroids by serum-free medium (SFM) culture and coculture with mesenchymal stromal cells (MSCs). Rats were feed normal protein diet (NPD) or high protein diet (HPD) for 7 days before liver digestion and isolation of hepatocytes. Hepatocyte spheroids were formed and maintained in a rocked suspension culture with or without MSCs in SFM or 10% serum-containing medium (SCM). Spheroid viability, kinetics of spheroid formation, hepatic functions, gene expression, and biochemical activities of rat hepatocyte spheroids were tested over 14 days of culture. We observed that urea cycle enzymes of hepatocyte spheroids can be induced by high protein diet. SFM and MSCs enhanced ammonia clearance and ureagenesis and stabilized integrity of hepatocyte spheroids compared to control conditions over 14 days. Hepatocytes from high protein diet-fed rats formed spheroids and maintained a high level of ammonia detoxification for over 14 days in a novel SFM. Hepatic functionality and spheroid integrity were further stabilized by coculture of hepatocytes with MSCs in the spheroid microenvironment. These findings have direct application to development of the spheroid reservoir bioartificial liver. © 2013 Cognizant Comm. Corp.
2012
R. Spokoini, Moldavski, O. , Nahmias, Y. , England, J. , Schuldiner, M. , and Kaganovich, D. . 2012. Confinement To Organelle-Associated Inclusion Structures Mediates Asymmetric Inheritance Of Aggregated Protein In Budding Yeast. Cell Reports, 2, Pp. 738-747. doi:10.1016/j.celrep.2012.08.024. Publisher's Version Abstract
The division of the S. cerevisiae budding yeast, which produces one mother cell and one daughter cell, is asymmetric with respect to aging. Remarkably, the asymmetry of yeast aging coincides with asymmetric inheritance of damaged and aggregated proteins by the mother cell. Here, we show that misfolded proteins are retained in the mother cell by being sequestered in juxtanuclear quality control compartment (JUNQ) and insoluble protein deposit (IPOD) inclusions, which are attached to organelles. Upon exposure to stress, misfolded proteins accumulate in stress foci that must be disaggregated by Hsp104 in order to be degraded or processed to JUNQ and IPOD. Cells that fail to deliver aggregates to an inclusion pass on aggregates to subsequent generations. The ability of cells to asymmetrically segregate aggregates during division has become an increasingly fascinating topic in the field of aggregation and aging. In this study, Kaganovich and colleagues advance our cellular understanding of aging by showing that confinement of aggregated proteins is precisely regulated by compartmentalization in inclusions and is key to preventing generational transfer of aggregated proteins. The authors provide mechanistic insight that enables control of asymmetric aggregate inheritance. © 2012 The Authors.
P. Roelandt, Obeid, S. , Paeshuyse, J. , Vanhove, J. , Van Lommel, A. , Nahmias, Y. , Nevens, F. , Neyts, J. , and Verfaillie, C.M. . 2012. Human Pluripotent Stem Cell-Derived Hepatocytes Support Complete Replication Of Hepatitis C Virus. Journal Of Hepatology, 57, Pp. 246-251. doi:10.1016/j.jhep.2012.03.030. Publisher's Version Abstract
Background & Aims: Worldwide, about 180 million people are chronically infected with the hepatitis C virus (HCV). Current in vitro culture systems for HCV depend chiefly on human hepatoma cell lines. Although primary human hepatocytes support HCV infection in vitro, and immunodeficient mice repopulated with human hepatocytes support HCV infection in vivo, these models are limited because of shortage of human livers to isolate hepatocytes. Therefore, there is significant interest in the establishment from of a HCV culture system in human stem cell-derived hepatocyte-like cells. Methods: Human embryonic stem cell (hESC)-derived hepatocytes were infected with HCV in the presence or absence of direct acting antivirals. After inoculation, replication of HCV was analyzed extensively. Results: We demonstrate that hESC-derived hepatocytes can be infected with the HCV JFH1 genotype 2a, resulting in the production of viral RNA in the stem cell progeny. Viral replication is inhibited by a non-nucleoside HCV polymerase-inhibitor (HCV-796), a cyclophilin binding molecule (Debio 025-Alisporivir) and the protease inhibitor VX-950 (Telaprevir). Stem cell-derived hepatocytes produced, for more than 10 days, the HCV core protein as well as virions that were capable of re-infecting hepatoma cells. Conclusions: Hepatocytes derived from hESC support the complete HCV replication cycle (including the production of infectious virus), and viral replication in these cells is efficiently inhibited by selective inhibitors of HCV replication. © 2012 European Association for the Study of the Liver. Published by Elsevier B.V. All rights reserved.
I. Nevo-Yassaf, Yaffe, Y. , Asher, M. , Ravid, O. , Eizenberg, S. , Henis, Y.I. , Nahmias, Y. , Hirschberg, K. , and Sklan, E.H. . 2012. Role For Tbc1D20 And Rab1 In Hepatitis C Virus Replication Via Interaction With Lipid Droplet-Bound Nonstructural Protein 5A. Journal Of Virology, 86, Pp. 6491-6502. doi:10.1128/JVI.00496-12. Publisher's Version Abstract
Replication and assembly of hepatitis C virus (HCV) depend on the host's secretory and lipid-biosynthetic machinery. Viral replication occurs on endoplasmic reticulum (ER)-derived modified membranes, while viral assembly is thought to occur on lipid droplets (LDs). A physical association and coordination between the viral replication and assembly complexes are prerequisites for efficient viral production. Nonstructural protein 5A (NS5A), which localizes both to the ER and LDs, is an ideal candidate for this function. Here, the interaction of NS5A with host cell membranes and binding partners was characterized in living cells. The binding of NS5A to LDs is apparently irreversible, both in HCV-infected cells and when ectopically expressed. In HCV-infected cells, NS5A fluorescence was observed around the LDs and in perinuclear structures that were incorporated into a highly immobile platform superimposed over the ER membrane. Moreover, TBC1D20 and its cognate GTPase Rab1 are recruited by NS5A to LDs. The NS5A-TBC1D20 interaction was shown to be essential for the viral life cycle. In cells, expression of the Rab1 dominant negative (Rab1DN) GTPase mutant abolished steady-state LDs. In infected cells, Rab1DN induced the elimination of NS5A from viral replication sites. Our results demonstrate the significance of the localization of NS5A to LDs and support a model whereby its interaction with TBC1D20 and Rab1 affects lipid droplet metabolism to promote the viral life cycle. © 2012, American Society for Microbiology.
2011
M. Shulman, Cohen, M. , Soto-Gutierrez, A. , Yagi, H. , Wang, H. , Goldwasser, J. , Lee-Parsons, C.W. , Benny-Ratsaby, O. , Yarmush, M.L. , and Nahmias, Y. . 2011. Enhancement Of Naringenin Bioavailability By Complexation With Hydroxypropoyl-Β-Cyclodextrin. Plos One, 6. doi:10.1371/journal.pone.0018033. Publisher's Version Abstract
The abundant flavonoid aglycone, naringenin, which is responsible for the bitter taste in grapefruits, has been shown to possess hypolipidemic and anti-inflammatory effects both in vitro and in vivo. Recently, our group demonstrated that naringenin inhibits hepatitis C virus (HCV) production, while others demonstrated its potential in the treatment of hyperlipidemia and diabetes. However, naringenin suffers from low oral bioavailability critically limiting its clinical potential. In this study, we demonstrate that the solubility of naringenin is enhanced by complexation with β-cyclodextrin, an FDA approved excipient. Hydroxypropoyl-β-cyclodextrin (HPβCD), specifically, increased the solubility of naringenin by over 400-fold, and its transport across a Caco-2 model of the gut epithelium by 11-fold. Complexation of naringenin with HPβCD increased its plasma concentrations when fed to rats, with AUC values increasing by 7.4-fold and Cmax increasing 14.6-fold. Moreover, when the complex was administered just prior to a meal it decreased VLDL levels by 42% and increased the rate of glucose clearance by 64% compared to naringenin alone. These effects correlated with increased expression of the PPAR co-activator, PGC1α in both liver and skeletal muscle. Histology and blood chemistry analysis indicated this route of administration was not associated with damage to the intestine, kidney, or liver. These results suggest that the complexation of naringenin with HPβCD is a viable option for the oral delivery of naringenin as a therapeutic entity with applications in the treatment of dyslipidemia, diabetes, and HCV infection. © 2011 Shulman et al.
E. Merquiol, Uzi, D. , Mueller, T. , Goldenberg, D. , Nahmias, Y. , Xavier, R.J. , Tirosh, B. , and Shibolet, O. . 2011. Hcv Causes Chronic Endoplasmic Reticulum Stress Leading To Adaptation And Interference With The Unfolded Protein Response. Plos One, 6. doi:10.1371/journal.pone.0024660. Publisher's Version Abstract
Background: The endoplasmic reticulum (ER) is the cellular site for protein folding. ER stress occurs when protein folding capacity is exceeded. This stress induces a cyto-protective signaling cascades termed the unfolded protein response (UPR) aimed at restoring homeostasis. While acute ER stress is lethal, chronic sub-lethal ER stress causes cells to adapt by attenuation of UPR activation. Hepatitis C virus (HCV), a major human pathogen, was shown to cause ER stress, however it is unclear whether HCV induces chronic ER stress, and if so whether adaptation mechanisms are initiated. We wanted to characterize the kinetics of HCV-induced ER stress during infection and assess adaptation mechanisms and their significance. Methods and Findings: The HuH7.5.1 cellular system and HCV-transgenic (HCV-Tg) mice were used to characterize HCV-induced ER stress/UPR pathway activation and adaptation. HCV induced a wave of acute ER stress peaking 2-5 days post-infection, which rapidly subsided thereafter. UPR pathways were activated including IRE1 and EIF2α phosphorylation, ATF6 cleavage and XBP-1 splicing. Downstream target genes including GADD34, ERdj4, p58ipk, ATF3 and ATF4 were upregulated. CHOP, a UPR regulated protein was activated and translocated to the nucleus. Remarkably, UPR activity did not return to baseline but remained elevated for up to 14 days post infection suggesting that chronic ER stress is induced. At this time, cells adapted to ER stress and were less responsive to further drug-induced ER stress. Similar results were obtained in HCV-Tg mice. Suppression of HCV by Interferon-α 2a treatment, restored UPR responsiveness to ER stress tolerant cells. Conclusions: Our study shows, for the first time, that HCV induces adaptation to chronic ER stress which was reversed upon viral suppression. These finding represent a novel viral mechanism to manipulate cellular response pathways. © 2011 Merquiol et al.
M.-L. Izamis, Sharma, N.S. , Uygun, B. , Bieganski, R. , Saeidi, N. , Nahmias, Y. , Uygun, K. , Yarmush, M.L. , and Berthiaume, F. . 2011. In Situ Metabolic Flux Analysis To Quantify The Liver Metabolic Response To Experimental Burn Injury. Biotechnology And Bioengineering, 108, Pp. 839-852. doi:10.1002/bit.22998. Publisher's Version Abstract
Trauma such as burns induces a hypermetabolic response associated with altered central carbon and nitrogen metabolism. The liver plays a key role in these metabolic changes; however, studies to date have evaluated the metabolic state of liver using ex vivo perfusions or isotope labeling techniques targeted to specific pathways. Herein, we developed a unique mass balance approach to characterize the metabolic state of the liver in situ, and used it to quantify the metabolic changes to experimental burn injury in rats. Rats received a sham (control uninjured), 20% or 40% total body surface area (TBSA) scald burn, and were allowed to develop a hypermetabolic response. One day prior to evaluation, all animals were fasted to deplete glycogen stores. Four days post-burn, blood flow rates in major vessels of the liver were measured, and blood samples harvested. We combined measurements of metabolite concentrations and flow rates in the major vessels entering and leaving the liver with a steady-state mass balance model to generate a quantitative picture of the metabolic state of liver. The main findings were: (1) Sham-burned animals exhibited a gluconeogenic pattern, consistent with the fasted state; (2) the 20% TBSA burn inhibited gluconeogenesis and exhibited glycolytic-like features with very few other significant changes; (3) the 40% TBSA burn, by contrast, further enhanced gluconeogenesis and also increased amino acid extraction, urea cycle reactions, and several reactions involved in oxidative phosphorylation. These results suggest that increasing the severity of injury does not lead to a simple dose-dependent metabolic response, but rather leads to qualitatively different responses. © 2010 Wiley Periodicals, Inc.
J. Goldwasser, Cohen, P.Y. , Lin, W. , Kitsberg, D. , Balaguer, P. , Polyak, S.J. , Chung, R.T. , Yarmush, M.L. , and Nahmias, Y. . 2011. Naringenin Inhibits The Assembly And Long-Term Production Of Infectious Hepatitis C Virus Particles Through A Ppar-Mediated Mechanism. Journal Of Hepatology, 55, Pp. 963-971. doi:10.1016/j.jhep.2011.02.011. Publisher's Version Abstract
Background & Aims: Hepatitis C virus (HCV) infection affects 3% of the world population and is the leading cause of chronic liver disease worldwide. Current standard of care is effective in only 50% of the patients, poorly tolerated, and associated with significant side effects and viral resistance. Recently, our group and others demonstrated that the HCV lifecycle is critically dependent on host lipid metabolism and that its production is metabolically modulated. Methods: The JFH1/Huh7.5.1 full lifecycle model of HCV was used to study the antiviral effects of naringenin on viral replication, assembly, and production. Activation of PPARα was elucidated using GAL4-PPARα fusion reporters, PPRE reporters, qRT-PCR, and metabolic studies. Metabolic results were confirmed in primary human hepatocytes. Results: We demonstrate that the grapefruit flavonoid naringenin dose-dependently inhibits HCV production without affecting intracellular levels of the viral RNA or protein. We show that naringenin blocks the assembly of intracellular infectious viral particles, upstream of viral egress. This antiviral effect is mediated in part by the activation of PPARα, leading to a decrease in VLDL production without causing hepatic lipid accumulation in Huh7.5.1 cells and primary human hepatocytes. Long-term treatment with naringenin leads to a rapid 1.4 log reduction in HCV, similar to 1000 U of interferon. During the washout period, HCV levels returned to normal, consistent with our proposed mechanism of action. Conclusions: The data demonstrates that naringenin is a non-toxic assembly inhibitor of HCV and that other PPARα agonists play a similar role in blocking viral production. The combination of naringenin with STAT-C agents could potentially bring a rapid reduction in HCV levels during the early treatment phase, an outcome associated with sustained virological response. © 2011 European Association for the Study of the Liver. Published by Elsevier B.V. All rights reserved.
P. Koria, Yagi, H. , Kitagawa, Y. , Megeed, Z. , Nahmias, Y. , Sheridan, R. , and Yarmush, M.L. . 2011. Self-Assembling Elastin-Like Peptides Growth Factor Chimeric Nanoparticles For The Treatment Of Chronic Wounds. Proceedings Of The National Academy Of Sciences Of The United States Of America, 108, Pp. 1034-1039. doi:10.1073/pnas.1009881108. Publisher's Version Abstract
Chronic wounds are associated with poor epidermal and dermal remodeling. Previous work has shown the efficacy of keratinocyte growth factor (KGF) in reepithelialization and elastin in dermal wound healing. Here we demonstrate the fabrication of a fusion protein comprising of elastin-like peptides and KGF. This fusion protein retains the performance characteristics of KGF and elastin as evidenced by its enhancement of keratinocyte and fibroblast proliferation. It also preserved the characteristic elastin-like peptides inverse phase transitioning allowing the recombinant protein to be expressed in bacterial hosts (such as Escherichia coli) and purified rapidly and easily using inverse temperature cycling. The fusion protein self-assembled into nanoparticles at physiological temperatures. Whenapplied to full thickness,woundsin Lepr db diabetic mice these particles enhanced reepithelialization and granulation, by 2- and 3-fold respectively, when compared to the controls. The data strongly suggests that these self-assembled nanoparticles may be beneficial in the treatment of chronic wounds resulting from diabetes or other underlying circulatory conditions.